Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Atf6bO35451 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Atf6bO35451 Gm11531-201ENSMUST00000117614 555 ntBASIC10.62□□□□□ -0.71
Atf6bO35451 Gm11597-201ENSMUST00000121423 964 ntBASIC10.62□□□□□ -0.71
Atf6bO35451 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.62□□□□□ -0.71
Atf6bO35451 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.62□□□□□ -0.71
Atf6bO35451 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.62□□□□□ -0.71
Atf6bO35451 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.62□□□□□ -0.71
Atf6bO35451 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.62□□□□□ -0.71
Atf6bO35451 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf6bO35451 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 Map1b-203ENSMUST00000223725 2669 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Gm25214-201ENSMUST00000104573 129 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.61□□□□□ -0.71
Atf6bO35451 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.61□□□□□ -0.71
Atf6bO35451 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Atf6bO35451 Gm26956-201ENSMUST00000182176 986 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Mir6420-201ENSMUST00000185032 102 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Gm7783-201ENSMUST00000204795 781 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Gm5950-201ENSMUST00000213337 772 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Gm30285-201ENSMUST00000214614 422 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Gm26035-201ENSMUST00000083065 308 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.61□□□□□ -0.71
Atf6bO35451 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf6bO35451 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.61□□□□□ -0.71
Atf6bO35451 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.61□□□□□ -0.71
Atf6bO35451 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Atf6bO35451 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Atf6bO35451 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Atf6bO35451 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.6□□□□□ -0.71
Atf6bO35451 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atf6bO35451 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Atf6bO35451 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms