Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gm9081-201ENSMUST00000182346 991 ntBASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gm37638-201ENSMUST00000194337 1123 ntBASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 AC164618.2-201ENSMUST00000224770 573 ntBASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gm8894-201ENSMUST00000074642 666 ntBASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hfm1D3Z4R1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Gm12453-201ENSMUST00000121981 331 ntBASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Mir8093-201ENSMUST00000185043 137 ntBASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.81■□□□□ 0.28
Hfm1D3Z4R1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Gm12179-201ENSMUST00000118344 1272 ntBASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Gm17214-201ENSMUST00000164501 541 ntBASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 AC153152.3-201ENSMUST00000222188 1135 ntBASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Gm10728-201ENSMUST00000194292 1829 ntBASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Gm44152-201ENSMUST00000205007 1691 ntBASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hfm1D3Z4R1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms