Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.82□□□□□ -0.84
Gm12887B1AVM1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm12887B1AVM1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Mir8102-201ENSMUST00000184148 139 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm43514-201ENSMUST00000198852 424 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Gm12887B1AVM1 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 BC043934-202ENSMUST00000185694 2356 ntBASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm12887B1AVM1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms