Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm10774-201ENSMUST00000188689 204 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm8959-201ENSMUST00000213150 571 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm1821-202ENSMUST00000227415 750 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm43378-201ENSMUST00000199336 582 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn8aQ9WTU3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm37246-201ENSMUST00000192665 835 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm5714-201ENSMUST00000197343 566 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn8aQ9WTU3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn8aQ9WTU3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms