Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Gm25043-201ENSMUST00000158604 212 ntBASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Gm27023-201ENSMUST00000182372 285 ntBASIC11.36□□□□□ -0.59
Cdc40Q9DC48 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Gm3096-201ENSMUST00000185770 364 ntBASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Rps4l-202ENSMUST00000204242 789 ntBASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Gm11930-201ENSMUST00000117788 190 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Gm14130-201ENSMUST00000118417 987 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Gm13097-201ENSMUST00000210722 397 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdc40Q9DC48 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm12058-201ENSMUST00000118614 437 ntBASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm24990-201ENSMUST00000157406 323 ntBASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm2260-201ENSMUST00000184965 657 ntBASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm38317-201ENSMUST00000195564 343 ntBASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm18212-201ENSMUST00000211678 889 ntBASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms