Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Gm28760-201ENSMUST00000185995 736 ntBASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3a3Q9D554 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm14701-201ENSMUST00000117156 348 ntBASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm8805-201ENSMUST00000117848 313 ntBASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm15487-201ENSMUST00000122373 465 ntBASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Itm2b-204ENSMUST00000228637 783 ntBASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3a3Q9D554 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3a3Q9D554 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms