Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm11814-201ENSMUST00000119515 929 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Mir1894-201ENSMUST00000122802 81 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm5706-201ENSMUST00000181525 993 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm39404-201ENSMUST00000216350 313 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm17794-201ENSMUST00000220252 955 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Gm18711-201ENSMUST00000199341 750 ntBASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ssu72Q9CY97 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm14247-201ENSMUST00000120950 237 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm20614-201ENSMUST00000177106 632 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm6244-201ENSMUST00000178732 841 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm27437-201ENSMUST00000183429 107 ntBASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms