Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gm29396-201ENSMUST00000185659 716 ntBASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gm37489-201ENSMUST00000191883 159 ntBASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc3Q9CWU5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm15370-201ENSMUST00000117158 253 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm13786-201ENSMUST00000122371 333 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm25043-201ENSMUST00000158604 212 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm42937-201ENSMUST00000197360 752 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Olfr284-202ENSMUST00000206647 966 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm6013-201ENSMUST00000212264 699 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Khdc3Q9CWU5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Khdc3Q9CWU5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms