Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm12058-201ENSMUST00000118614 437 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm13297-201ENSMUST00000120205 934 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm37201-201ENSMUST00000191845 523 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm12314-201ENSMUST00000118104 538 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm12241-201ENSMUST00000118330 726 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Mir8109-201ENSMUST00000184375 117 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm45331-201ENSMUST00000209868 554 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm39404-201ENSMUST00000216350 313 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.18□□□□□ -0.46
Trim33Q99PP7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trim33Q99PP7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms