Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Gm22344-201ENSMUST00000122642 278 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Gm13827-201ENSMUST00000148801 372 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Gm18552-201ENSMUST00000187425 538 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Gm6304-201ENSMUST00000096579 447 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm11996-201ENSMUST00000117538 915 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 AA623943-201ENSMUST00000121794 354 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm22388-201ENSMUST00000158194 248 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm11736-201ENSMUST00000121468 505 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm8968-201ENSMUST00000199133 1303 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gm33707-201ENSMUST00000195135 569 ntBASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh23Q99PF4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Gm37207-201ENSMUST00000194284 296 ntBASIC12.03□□□□□ -0.48
Cdh23Q99PF4 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.03□□□□□ -0.48
Cdh23Q99PF4 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Gm25569-201ENSMUST00000157175 131 ntBASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms