Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfc4Q99J62 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm11663-201ENSMUST00000117888 290 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm22144-201ENSMUST00000157402 102 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm29155-201ENSMUST00000185910 269 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm38210-201ENSMUST00000191944 809 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.04□□□□□ -0.16
Rfc4Q99J62 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc4Q99J62 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm11956-201ENSMUST00000119525 512 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm14585-201ENSMUST00000120713 634 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm11246-201ENSMUST00000120880 345 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Rfc4Q99J62 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm18711-201ENSMUST00000199341 750 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rfc4Q99J62 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.03□□□□□ -0.16
Rfc4Q99J62 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc4Q99J62 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rfc4Q99J62 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc4Q99J62 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfc4Q99J62 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rfc4Q99J62 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rfc4Q99J62 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.02□□□□□ -0.17
Rfc4Q99J62 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfc4Q99J62 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc4Q99J62 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.02□□□□□ -0.17
Rfc4Q99J62 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfc4Q99J62 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfc4Q99J62 Gm28324-201ENSMUST00000187913 264 ntBASIC14.02□□□□□ -0.17
Rfc4Q99J62 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms