Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thumpd1Q99J36 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Gm23912-201ENSMUST00000104687 87 ntBASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Gm7488-201ENSMUST00000117148 684 ntBASIC10.85□□□□□ -0.67
Thumpd1Q99J36 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.85□□□□□ -0.67
Thumpd1Q99J36 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Thumpd1Q99J36 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms