Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm37424-201ENSMUST00000191727 561 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 AY702102-202ENSMUST00000194651 1173 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm19184-201ENSMUST00000196798 928 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm44405-201ENSMUST00000198952 126 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm5186-201ENSMUST00000218781 920 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga3Q91XY5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Mir1247-201ENSMUST00000116706 82 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm5187-201ENSMUST00000117317 991 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm14127-201ENSMUST00000117906 678 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga3Q91XY5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga3Q91XY5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms