Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm15547-201ENSMUST00000122152 333 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm26083-201ENSMUST00000157904 193 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Gm11930-201ENSMUST00000117788 190 ntBASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Gm5950-201ENSMUST00000213337 772 ntBASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhga4Q91XY4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm22323-201ENSMUST00000103832 109 ntBASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm11531-201ENSMUST00000117614 555 ntBASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm37259-201ENSMUST00000193903 849 ntBASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms