Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm22144-201ENSMUST00000157402 102 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm28686-201ENSMUST00000187404 609 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm8956-201ENSMUST00000203939 825 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm9132-201ENSMUST00000210182 832 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm5705-201ENSMUST00000066241 711 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Usp6nlQ80XC3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Gm23912-201ENSMUST00000104687 87 ntBASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Gm43058-201ENSMUST00000197645 625 ntBASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Snora73b-201ENSMUST00000083419 205 ntBASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Usp6nlQ80XC3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.46□□□□□ -0.26
Usp6nlQ80XC3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Usp6nlQ80XC3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Usp6nlQ80XC3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm11663-201ENSMUST00000117888 290 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm14247-201ENSMUST00000120950 237 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm4726-201ENSMUST00000135604 736 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm7666-201ENSMUST00000146631 819 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm6019-201ENSMUST00000148369 736 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm19287-201ENSMUST00000203190 358 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Usp6nlQ80XC3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.44□□□□□ -0.26
Usp6nlQ80XC3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 183.3 ms