Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slx4Q6P1D7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Gm9673-201ENSMUST00000119287 781 ntBASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Gm17825-201ENSMUST00000206836 794 ntBASIC18.43■□□□□ 0.54
Slx4Q6P1D7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Slx4Q6P1D7 Gm5555-201ENSMUST00000120352 1111 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm14395-201ENSMUST00000120494 563 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm25604-201ENSMUST00000158359 133 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm5870-201ENSMUST00000196461 282 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm8155-201ENSMUST00000216363 1612 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm15610-201ENSMUST00000120584 195 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Gm14005-208ENSMUST00000223654 681 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 CT009527.1-201ENSMUST00000224205 339 ntBASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slx4Q6P1D7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm18798-201ENSMUST00000187264 1700 ntBASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Adra1a-206ENSMUST00000225182 2337 ntBASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm9507-202ENSMUST00000180157 654 ntBASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm37826-201ENSMUST00000195329 322 ntBASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm5340-201ENSMUST00000203733 880 ntBASIC18.41■□□□□ 0.54
Slx4Q6P1D7 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 AC158388.3-202ENSMUST00000225517 775 ntBASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms