Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.97□□□□□ -0.33
Scube3Q66PY1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scube3Q66PY1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scube3Q66PY1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm28359-201ENSMUST00000187470 1322 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm24934-201ENSMUST00000103764 111 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm15808-201ENSMUST00000119046 604 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm10925-201ENSMUST00000189941 678 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 AA914427-201ENSMUST00000193194 1166 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm38317-201ENSMUST00000195564 343 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Gm13097-201ENSMUST00000210722 397 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 AC160962.2-201ENSMUST00000224761 632 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.96□□□□□ -0.33
Scube3Q66PY1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scube3Q66PY1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.96□□□□□ -0.34
Scube3Q66PY1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.96□□□□□ -0.34
Scube3Q66PY1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scube3Q66PY1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Gm24830-201ENSMUST00000102024 166 ntBASIC12.95□□□□□ -0.34
Scube3Q66PY1 Mir877-201ENSMUST00000104738 85 ntBASIC12.95□□□□□ -0.34
Scube3Q66PY1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Gm12015-201ENSMUST00000117065 843 ntBASIC12.95□□□□□ -0.34
Scube3Q66PY1 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.95□□□□□ -0.34
Scube3Q66PY1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scube3Q66PY1 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms