Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm9022-201ENSMUST00000182482 992 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm44124-201ENSMUST00000204159 472 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.97□□□□□ -0.33
Shroom1Q5SX79 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Gm22334-201ENSMUST00000158070 133 ntBASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Gm24514-201ENSMUST00000174961 285 ntBASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Gm28071-201ENSMUST00000190355 478 ntBASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.97□□□□□ -0.33
Shroom1Q5SX79 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm11989-201ENSMUST00000117240 672 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm11362-201ENSMUST00000118838 850 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm15711-201ENSMUST00000118889 535 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm20426-201ENSMUST00000173657 440 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm5523-201ENSMUST00000180415 997 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm18038-201ENSMUST00000197900 485 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm43962-201ENSMUST00000203898 190 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms