Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps54Q5SPW0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.62□□□□□ -0.07
Vps54Q5SPW0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Gm23200-201ENSMUST00000104379 132 ntBASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Gm15711-201ENSMUST00000118889 535 ntBASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Map1b-203ENSMUST00000223725 2669 ntBASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Vps54Q5SPW0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Gm28450-201ENSMUST00000187349 638 ntBASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Gm37466-201ENSMUST00000195692 652 ntBASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps54Q5SPW0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm22133-201ENSMUST00000102082 109 ntBASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm23949-201ENSMUST00000104027 127 ntBASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm12217-201ENSMUST00000118858 696 ntBASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm5419-201ENSMUST00000119301 527 ntBASIC14.59□□□□□ -0.07
Vps54Q5SPW0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps54Q5SPW0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps54Q5SPW0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.58□□□□□ -0.07
Vps54Q5SPW0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vps54Q5SPW0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Vps54Q5SPW0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Vps54Q5SPW0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps54Q5SPW0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms