Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim80Q3V061 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim80Q3V061 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim80Q3V061 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim80Q3V061 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim80Q3V061 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim80Q3V061 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim80Q3V061 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim80Q3V061 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim80Q3V061 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim80Q3V061 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Trim80Q3V061 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Mir686-201ENSMUST00000102174 109 ntBASIC12.64□□□□□ -0.39
Trim80Q3V061 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gm13813-201ENSMUST00000120998 787 ntBASIC12.64□□□□□ -0.39
Trim80Q3V061 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gm8810-201ENSMUST00000172895 754 ntBASIC12.64□□□□□ -0.39
Trim80Q3V061 Proscos-202ENSMUST00000178990 666 ntBASIC12.64□□□□□ -0.39
Trim80Q3V061 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gm45880-201ENSMUST00000213041 853 ntBASIC12.64□□□□□ -0.39
Trim80Q3V061 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.64□□□□□ -0.39
Trim80Q3V061 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim80Q3V061 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.64□□□□□ -0.39
Trim80Q3V061 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim80Q3V061 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim80Q3V061 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Gm14723-201ENSMUST00000118686 215 ntBASIC12.63□□□□□ -0.39
Trim80Q3V061 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.63□□□□□ -0.39
Trim80Q3V061 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.63□□□□□ -0.39
Trim80Q3V061 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim80Q3V061 Gm4271-201ENSMUST00000174444 973 ntBASIC12.63□□□□□ -0.39
Trim80Q3V061 Gm9630-201ENSMUST00000178304 885 ntBASIC12.63□□□□□ -0.39
Trim80Q3V061 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.63□□□□□ -0.39
Trim80Q3V061 Gm42627-201ENSMUST00000197347 224 ntBASIC12.63□□□□□ -0.39
Trim80Q3V061 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim80Q3V061 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim80Q3V061 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim80Q3V061 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trim80Q3V061 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim80Q3V061 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms