Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Brf2Q3UAW9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm12742-201ENSMUST00000117326 410 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm17420-201ENSMUST00000164753 153 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm27572-201ENSMUST00000183702 255 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm37489-201ENSMUST00000191883 159 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm19309-201ENSMUST00000218295 205 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Brf2Q3UAW9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.47□□□□□ -0.57
Brf2Q3UAW9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Gm7046-201ENSMUST00000221351 977 ntBASIC11.47□□□□□ -0.57
Brf2Q3UAW9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.47□□□□□ -0.57
Brf2Q3UAW9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms