Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Cdx4Q07424 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Mir877-201ENSMUST00000104738 85 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm11964-201ENSMUST00000120982 444 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm25668-201ENSMUST00000157700 129 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm21769-201ENSMUST00000211922 111 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.45□□□□□ -0.9
Cdx4Q07424 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx4Q07424 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cdx4Q07424 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Cdx4Q07424 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.44□□□□□ -0.9
Cdx4Q07424 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.44□□□□□ -0.9
Cdx4Q07424 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.44□□□□□ -0.9
Cdx4Q07424 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cdx4Q07424 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.44□□□□□ -0.9
Cdx4Q07424 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cdx4Q07424 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx4Q07424 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx4Q07424 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms