Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim43cP86449 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim43cP86449 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim43cP86449 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43cP86449 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43cP86449 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.26□□□□□ -0.29
Trim43cP86449 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Trim43cP86449 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim43cP86449 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim43cP86449 Gm7722-201ENSMUST00000120646 741 ntBASIC13.25□□□□□ -0.29
Trim43cP86449 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim43cP86449 Gm7584-201ENSMUST00000175829 940 ntBASIC13.25□□□□□ -0.29
Trim43cP86449 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim43cP86449 Gm9136-201ENSMUST00000193368 454 ntBASIC13.25□□□□□ -0.29
Trim43cP86449 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim43cP86449 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim43cP86449 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trim43cP86449 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Trim43cP86449 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.25□□□□□ -0.29
Trim43cP86449 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43cP86449 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.24□□□□□ -0.29
Trim43cP86449 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim43cP86449 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Gm18893-201ENSMUST00000198416 943 ntBASIC13.24□□□□□ -0.29
Trim43cP86449 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Gm43822-201ENSMUST00000200285 476 ntBASIC13.24□□□□□ -0.29
Trim43cP86449 Gm3961-201ENSMUST00000204425 994 ntBASIC13.24□□□□□ -0.29
Trim43cP86449 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim43cP86449 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Trim43cP86449 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim43cP86449 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim43cP86449 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim43cP86449 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim43cP86449 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43cP86449 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim43cP86449 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim43cP86449 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trim43cP86449 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms