Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SgcaP82350 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.23□□□□□ -0.77
SgcaP82350 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Gm14921-201ENSMUST00000118643 908 ntBASIC10.23□□□□□ -0.77
SgcaP82350 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.23□□□□□ -0.77
SgcaP82350 Gm5354-201ENSMUST00000182417 973 ntBASIC10.23□□□□□ -0.77
SgcaP82350 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.23□□□□□ -0.77
SgcaP82350 Gm10576-201ENSMUST00000191927 825 ntBASIC10.23□□□□□ -0.77
SgcaP82350 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.23□□□□□ -0.77
SgcaP82350 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.23□□□□□ -0.77
SgcaP82350 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.23□□□□□ -0.77
SgcaP82350 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.23□□□□□ -0.77
SgcaP82350 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.23□□□□□ -0.77
SgcaP82350 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.23□□□□□ -0.77
SgcaP82350 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SgcaP82350 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.23□□□□□ -0.77
SgcaP82350 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SgcaP82350 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SgcaP82350 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SgcaP82350 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.22□□□□□ -0.77
SgcaP82350 Gm14704-201ENSMUST00000120300 874 ntBASIC10.22□□□□□ -0.77
SgcaP82350 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SgcaP82350 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.22□□□□□ -0.77
SgcaP82350 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.22□□□□□ -0.77
SgcaP82350 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SgcaP82350 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SgcaP82350 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Gm44397-201ENSMUST00000195950 113 ntBASIC10.22□□□□□ -0.77
SgcaP82350 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.22□□□□□ -0.77
SgcaP82350 Gm7730-201ENSMUST00000212486 454 ntBASIC10.22□□□□□ -0.77
SgcaP82350 Gm6983-201ENSMUST00000214912 628 ntBASIC10.22□□□□□ -0.77
SgcaP82350 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Gm5867-201ENSMUST00000063197 592 ntBASIC10.22□□□□□ -0.77
SgcaP82350 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.22□□□□□ -0.77
SgcaP82350 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SgcaP82350 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcaP82350 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.22□□□□□ -0.77
SgcaP82350 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SgcaP82350 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.22□□□□□ -0.77
SgcaP82350 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms