Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Six5P70178 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Six5P70178 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.43□□□□□ -0.58
Six5P70178 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six5P70178 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.42□□□□□ -0.58
Six5P70178 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Gm23270-201ENSMUST00000104055 131 ntBASIC11.42□□□□□ -0.58
Six5P70178 Gm14644-201ENSMUST00000116671 647 ntBASIC11.42□□□□□ -0.58
Six5P70178 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.42□□□□□ -0.58
Six5P70178 Gm8885-201ENSMUST00000189382 598 ntBASIC11.42□□□□□ -0.58
Six5P70178 Gm38341-201ENSMUST00000195357 515 ntBASIC11.42□□□□□ -0.58
Six5P70178 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.42□□□□□ -0.58
Six5P70178 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Six5P70178 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Six5P70178 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Six5P70178 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Six5P70178 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Six5P70178 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.42□□□□□ -0.58
Six5P70178 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six5P70178 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Six5P70178 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.41□□□□□ -0.58
Six5P70178 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Six5P70178 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.41□□□□□ -0.58
Six5P70178 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Six5P70178 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Gm14109-201ENSMUST00000118814 309 ntBASIC11.41□□□□□ -0.58
Six5P70178 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Six5P70178 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six5P70178 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Six5P70178 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.41□□□□□ -0.58
Six5P70178 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.41□□□□□ -0.58
Six5P70178 Gm9230-201ENSMUST00000188228 532 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms