Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.36■□□□□ 0.05
Msh6P54276 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Msh6P54276 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Msh6P54276 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Msh6P54276 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Gm11663-201ENSMUST00000117888 290 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.36■□□□□ 0.05
Msh6P54276 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Msh6P54276 Gm27910-201ENSMUST00000185004 107 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Gm28324-201ENSMUST00000187913 264 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Gm8956-201ENSMUST00000203939 825 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.36■□□□□ 0.05
Msh6P54276 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Msh6P54276 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.35■□□□□ 0.05
Msh6P54276 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Map1b-203ENSMUST00000223725 2669 ntBASIC15.35■□□□□ 0.05
Msh6P54276 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Msh6P54276 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.35■□□□□ 0.05
Msh6P54276 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.35■□□□□ 0.05
Msh6P54276 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.35■□□□□ 0.05
Msh6P54276 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Gm23045-201ENSMUST00000175041 96 ntBASIC15.35■□□□□ 0.05
Msh6P54276 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Gm28686-201ENSMUST00000187404 609 ntBASIC15.35■□□□□ 0.05
Msh6P54276 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.35■□□□□ 0.05
Msh6P54276 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.35■□□□□ 0.05
Msh6P54276 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.35■□□□□ 0.05
Msh6P54276 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.35■□□□□ 0.05
Msh6P54276 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.35■□□□□ 0.05
Msh6P54276 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.35■□□□□ 0.05
Msh6P54276 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh6P54276 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.34■□□□□ 0.05
Msh6P54276 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC15.34■□□□□ 0.05
Msh6P54276 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Msh6P54276 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Msh6P54276 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Msh6P54276 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Msh6P54276 Gm11949-201ENSMUST00000117640 372 ntBASIC15.34■□□□□ 0.05
Msh6P54276 Gm11340-201ENSMUST00000119226 412 ntBASIC15.34■□□□□ 0.05
Msh6P54276 Gm8737-201ENSMUST00000122208 642 ntBASIC15.34■□□□□ 0.05
Msh6P54276 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.34■□□□□ 0.05
Msh6P54276 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.34■□□□□ 0.05
Msh6P54276 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Msh6P54276 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.34■□□□□ 0.05
Msh6P54276 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.34■□□□□ 0.05
Msh6P54276 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.34■□□□□ 0.05
Msh6P54276 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.34■□□□□ 0.05
Msh6P54276 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.34■□□□□ 0.05
Msh6P54276 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.34■□□□□ 0.05
Msh6P54276 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Msh6P54276 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh6P54276 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Msh6P54276 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.33■□□□□ 0.05
Msh6P54276 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh6P54276 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms