Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm15610-201ENSMUST00000120584 195 ntBASIC12.33□□□□□ -0.44
Lhx3P50481 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm16505-201ENSMUST00000179981 232 ntBASIC12.33□□□□□ -0.44
Lhx3P50481 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.33□□□□□ -0.44
Lhx3P50481 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm8956-201ENSMUST00000203939 825 ntBASIC12.33□□□□□ -0.44
Lhx3P50481 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.33□□□□□ -0.44
Lhx3P50481 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.33□□□□□ -0.44
Lhx3P50481 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.33□□□□□ -0.44
Lhx3P50481 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx3P50481 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.33□□□□□ -0.44
Lhx3P50481 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lhx3P50481 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Lhx3P50481 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.32□□□□□ -0.44
Lhx3P50481 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 Gm7857-201ENSMUST00000117957 358 ntBASIC12.32□□□□□ -0.44
Lhx3P50481 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.32□□□□□ -0.44
Lhx3P50481 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lhx3P50481 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lhx3P50481 Gm28071-201ENSMUST00000190355 478 ntBASIC12.32□□□□□ -0.44
Lhx3P50481 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lhx3P50481 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.32□□□□□ -0.44
Lhx3P50481 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Lhx3P50481 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lhx3P50481 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx3P50481 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Lhx3P50481 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.31□□□□□ -0.44
Lhx3P50481 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Lhx3P50481 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Gm23200-201ENSMUST00000104379 132 ntBASIC12.31□□□□□ -0.44
Lhx3P50481 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lhx3P50481 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.31□□□□□ -0.44
Lhx3P50481 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.31□□□□□ -0.44
Lhx3P50481 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.31□□□□□ -0.44
Lhx3P50481 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.31□□□□□ -0.44
Lhx3P50481 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.31□□□□□ -0.44
Lhx3P50481 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.31□□□□□ -0.44
Lhx3P50481 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx3P50481 Gm28450-201ENSMUST00000187349 638 ntBASIC12.31□□□□□ -0.44
Lhx3P50481 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms