Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rfx3P48381 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rfx3P48381 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfx3P48381 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfx3P48381 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.02□□□□□ -0.64
Rfx3P48381 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfx3P48381 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.02□□□□□ -0.64
Rfx3P48381 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rfx3P48381 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfx3P48381 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfx3P48381 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.02□□□□□ -0.65
Rfx3P48381 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Rfx3P48381 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm11425-201ENSMUST00000119608 498 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Gm11591-201ENSMUST00000120063 702 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm16379-201ENSMUST00000161469 348 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm8738-201ENSMUST00000172606 329 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Gm25927-201ENSMUST00000175058 117 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm8762-201ENSMUST00000193486 339 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.02□□□□□ -0.65
Rfx3P48381 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm9396-201ENSMUST00000076703 567 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.02□□□□□ -0.65
Rfx3P48381 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.02□□□□□ -0.65
Rfx3P48381 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.02□□□□□ -0.65
Rfx3P48381 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfx3P48381 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Rfx3P48381 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Gm12742-201ENSMUST00000117326 410 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.01□□□□□ -0.65
Rfx3P48381 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Snora78-201ENSMUST00000158630 128 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 Gm45784-201ENSMUST00000188360 142 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Gm45925-201ENSMUST00000218882 744 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Gm45930-201ENSMUST00000221330 292 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Snora73a-201ENSMUST00000082453 205 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 Gm22058-201ENSMUST00000083393 310 ntBASIC11.01□□□□□ -0.65
Rfx3P48381 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms