Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.57□□□□□ -0.4
Msh2P43247 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Gm15703-201ENSMUST00000120250 880 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.57□□□□□ -0.4
Msh2P43247 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
Msh2P43247 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.57□□□□□ -0.4
Msh2P43247 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.57□□□□□ -0.4
Msh2P43247 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msh2P43247 Gm3890-201ENSMUST00000182416 207 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Gm27572-201ENSMUST00000183702 255 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.57□□□□□ -0.4
Msh2P43247 Gm45880-201ENSMUST00000213041 853 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msh2P43247 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msh2P43247 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Msh2P43247 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.57□□□□□ -0.4
Msh2P43247 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.57□□□□□ -0.4
Msh2P43247 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Msh2P43247 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.57□□□□□ -0.4
Msh2P43247 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Msh2P43247 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.56□□□□□ -0.4
Msh2P43247 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.56□□□□□ -0.4
Msh2P43247 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.56□□□□□ -0.4
Msh2P43247 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.56□□□□□ -0.4
Msh2P43247 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.56□□□□□ -0.4
Msh2P43247 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.56□□□□□ -0.4
Msh2P43247 Gm38002-201ENSMUST00000193255 180 ntBASIC12.56□□□□□ -0.4
Msh2P43247 Gm19309-201ENSMUST00000218295 205 ntBASIC12.56□□□□□ -0.4
Msh2P43247 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.56□□□□□ -0.4
Msh2P43247 Gm10478-201ENSMUST00000084451 396 ntBASIC12.56□□□□□ -0.4
Msh2P43247 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.56□□□□□ -0.4
Msh2P43247 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.56□□□□□ -0.4
Msh2P43247 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh2P43247 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.55□□□□□ -0.4
Msh2P43247 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.55□□□□□ -0.4
Msh2P43247 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Gm12502-201ENSMUST00000120197 444 ntBASIC12.55□□□□□ -0.4
Msh2P43247 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.55□□□□□ -0.4
Msh2P43247 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Msh2P43247 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Msh2P43247 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.55□□□□□ -0.4
Msh2P43247 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.55□□□□□ -0.4
Msh2P43247 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.55□□□□□ -0.4
Msh2P43247 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.55□□□□□ -0.4
Msh2P43247 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh2P43247 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms