Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cxcl12P40224 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Cxcl12P40224 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm3150-201ENSMUST00000166418 204 ntBASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm37981-201ENSMUST00000194280 535 ntBASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.51□□□□□ -0.41
Cxcl12P40224 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.51□□□□□ -0.41
Cxcl12P40224 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.51□□□□□ -0.41
Cxcl12P40224 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl12P40224 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.5□□□□□ -0.41
Cxcl12P40224 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.5□□□□□ -0.41
Cxcl12P40224 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm11979-201ENSMUST00000119629 743 ntBASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm11354-201ENSMUST00000121974 422 ntBASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm7150-201ENSMUST00000122032 981 ntBASIC12.5□□□□□ -0.41
Cxcl12P40224 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm6108-201ENSMUST00000208365 367 ntBASIC12.5□□□□□ -0.41
Cxcl12P40224 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.5□□□□□ -0.41
Cxcl12P40224 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcl12P40224 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl12P40224 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms