Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fen1P39749 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.28□□□□□ -0.44
Fen1P39749 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.28□□□□□ -0.44
Fen1P39749 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.28□□□□□ -0.44
Fen1P39749 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.28□□□□□ -0.44
Fen1P39749 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Gm22121-201ENSMUST00000175148 54 ntBASIC12.28□□□□□ -0.44
Fen1P39749 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.28□□□□□ -0.44
Fen1P39749 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.28□□□□□ -0.44
Fen1P39749 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.28□□□□□ -0.44
Fen1P39749 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.28□□□□□ -0.44
Fen1P39749 Gm8598-201ENSMUST00000221184 836 ntBASIC12.28□□□□□ -0.44
Fen1P39749 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.28□□□□□ -0.44
Fen1P39749 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Fen1P39749 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.28□□□□□ -0.44
Fen1P39749 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fen1P39749 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fen1P39749 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fen1P39749 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.27□□□□□ -0.44
Fen1P39749 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fen1P39749 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fen1P39749 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Fen1P39749 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fen1P39749 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Fen1P39749 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fen1P39749 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Fen1P39749 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Gm13612-201ENSMUST00000119276 390 ntBASIC12.27□□□□□ -0.45
Fen1P39749 Gm13369-201ENSMUST00000119442 987 ntBASIC12.27□□□□□ -0.45
Fen1P39749 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.27□□□□□ -0.45
Fen1P39749 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Fen1P39749 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.27□□□□□ -0.45
Fen1P39749 Proscos-202ENSMUST00000178990 666 ntBASIC12.27□□□□□ -0.45
Fen1P39749 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Gm37042-201ENSMUST00000193816 581 ntBASIC12.27□□□□□ -0.45
Fen1P39749 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.27□□□□□ -0.45
Fen1P39749 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.27□□□□□ -0.45
Fen1P39749 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.27□□□□□ -0.45
Fen1P39749 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.27□□□□□ -0.45
Fen1P39749 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Fen1P39749 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Fen1P39749 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Fen1P39749 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fen1P39749 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Fen1P39749 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms