Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm11597-201ENSMUST00000121423 964 ntBASIC11.52□□□□□ -0.57
TP20293 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
TP20293 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.52□□□□□ -0.57
TP20293 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.52□□□□□ -0.57
TP20293 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
TP20293 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.51□□□□□ -0.57
TP20293 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TP20293 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.51□□□□□ -0.57
TP20293 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TP20293 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.51□□□□□ -0.57
TP20293 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TP20293 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.51□□□□□ -0.57
TP20293 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Gm37489-201ENSMUST00000191883 159 ntBASIC11.51□□□□□ -0.57
TP20293 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.51□□□□□ -0.57
TP20293 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.51□□□□□ -0.57
TP20293 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TP20293 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.51□□□□□ -0.57
TP20293 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TP20293 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TP20293 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TP20293 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Map1b-203ENSMUST00000223725 2669 ntBASIC11.5□□□□□ -0.57
TP20293 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
TP20293 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Gm13875-201ENSMUST00000120162 282 ntBASIC11.5□□□□□ -0.57
TP20293 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
TP20293 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
TP20293 Gm9630-201ENSMUST00000178304 885 ntBASIC11.5□□□□□ -0.57
TP20293 Gm2546-201ENSMUST00000182630 991 ntBASIC11.5□□□□□ -0.57
TP20293 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.5□□□□□ -0.57
TP20293 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.5□□□□□ -0.57
TP20293 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.5□□□□□ -0.57
TP20293 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
TP20293 Gm10608-202ENSMUST00000213924 676 ntBASIC11.5□□□□□ -0.57
TP20293 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.5□□□□□ -0.57
TP20293 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TP20293 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.5□□□□□ -0.57
TP20293 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.5□□□□□ -0.57
TP20293 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TP20293 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
TP20293 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.5□□□□□ -0.57
TP20293 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TP20293 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms