Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl3P10855 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm15207-201ENSMUST00000119259 442 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm23045-201ENSMUST00000175041 96 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm25072-201ENSMUST00000175233 235 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm23153-201ENSMUST00000175323 313 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.74□□□□□ -0.69
Ccl3P10855 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm37299-201ENSMUST00000193951 826 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm37905-201ENSMUST00000195310 341 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm5714-201ENSMUST00000197343 566 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm44980-201ENSMUST00000205826 314 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl3P10855 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Ccl3P10855 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.74□□□□□ -0.69
Ccl3P10855 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccl3P10855 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccl3P10855 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccl3P10855 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccl3P10855 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.73□□□□□ -0.69
Ccl3P10855 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Ccl3P10855 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm22920-201ENSMUST00000102175 109 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccl3P10855 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm1848-201ENSMUST00000120711 789 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Gm12516-201ENSMUST00000120819 385 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccl3P10855 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
Ccl3P10855 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm4310-201ENSMUST00000177847 889 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Gm8492-201ENSMUST00000182375 987 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Gm9645-201ENSMUST00000197131 792 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.73□□□□□ -0.69
Ccl3P10855 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccl3P10855 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccl3P10855 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccl3P10855 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl3P10855 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl3P10855 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms