Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.01□□□□□ -0.33
Hoxb8P09632 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.01□□□□□ -0.33
Hoxb8P09632 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxb8P09632 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.01□□□□□ -0.33
Hoxb8P09632 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Gm15432-201ENSMUST00000121106 195 ntBASIC13.01□□□□□ -0.33
Hoxb8P09632 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxb8P09632 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.01□□□□□ -0.33
Hoxb8P09632 Gm11597-201ENSMUST00000121423 964 ntBASIC13.01□□□□□ -0.33
Hoxb8P09632 Gm5616-201ENSMUST00000165252 384 ntBASIC13.01□□□□□ -0.33
Hoxb8P09632 Gm8741-201ENSMUST00000174736 384 ntBASIC13.01□□□□□ -0.33
Hoxb8P09632 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.01□□□□□ -0.33
Hoxb8P09632 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb8P09632 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxb8P09632 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxb8P09632 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxb8P09632 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxb8P09632 Gm13045-201ENSMUST00000119019 712 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Gm23119-201ENSMUST00000158610 140 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Gm9555-201ENSMUST00000200908 583 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Gm45219-201ENSMUST00000205602 465 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Gm44882-201ENSMUST00000205702 802 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb8P09632 Gm39404-201ENSMUST00000216350 313 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13□□□□□ -0.33
Hoxb8P09632 AC125209.1-201ENSMUST00000225812 766 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb8P09632 Gm10179-201ENSMUST00000086233 688 ntBASIC13□□□□□ -0.33
Hoxb8P09632 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxb8P09632 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb8P09632 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb8P09632 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.99□□□□□ -0.33
Hoxb8P09632 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Gm9022-201ENSMUST00000182482 992 ntBASIC12.99□□□□□ -0.33
Hoxb8P09632 Gm19353-201ENSMUST00000184561 445 ntBASIC12.99□□□□□ -0.33
Hoxb8P09632 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Gm18304-201ENSMUST00000189162 546 ntBASIC12.99□□□□□ -0.33
Hoxb8P09632 Gm43058-201ENSMUST00000197645 625 ntBASIC12.99□□□□□ -0.33
Hoxb8P09632 Gm44126-201ENSMUST00000204831 514 ntBASIC12.99□□□□□ -0.33
Hoxb8P09632 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.99□□□□□ -0.33
Hoxb8P09632 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb8P09632 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb8P09632 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms