Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm44237-201ENSMUST00000205183 936 ntBASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm18056-201ENSMUST00000207670 568 ntBASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm18061-201ENSMUST00000208350 562 ntBASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm18063-201ENSMUST00000208529 568 ntBASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm18052-201ENSMUST00000208750 559 ntBASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.69□□□□□ -0.86
Hoxd3P09027 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.69□□□□□ -0.86
Hoxd3P09027 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Hoxd3P09027 Gm10617-201ENSMUST00000098368 1172 ntBASIC9.69□□□□□ -0.86
Hoxd3P09027 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Hoxd3P09027 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxd3P09027 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 AC154806.5-202ENSMUST00000227217 1443 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm24830-201ENSMUST00000102024 166 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm15703-201ENSMUST00000120250 880 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm25295-201ENSMUST00000122794 306 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm15276-201ENSMUST00000145953 498 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm8582-201ENSMUST00000164061 789 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm25890-201ENSMUST00000177643 165 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm22614-201ENSMUST00000178300 165 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm20778-201ENSMUST00000178524 627 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm44353-201ENSMUST00000200618 138 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm13097-201ENSMUST00000210722 397 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm6562-201ENSMUST00000221903 464 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm22042-201ENSMUST00000082989 165 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm26232-201ENSMUST00000083360 166 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm24136-201ENSMUST00000083374 165 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm26110-201ENSMUST00000083971 165 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.68□□□□□ -0.86
Hoxd3P09027 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hoxd3P09027 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms