Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
P04224 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
P04224 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
P04224 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P04224 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P04224 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
P04224 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
P04224 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
P04224 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.7□□□□□ -0.7
P04224 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.7□□□□□ -0.7
P04224 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
P04224 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.7□□□□□ -0.7
P04224 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
P04224 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
P04224 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.7□□□□□ -0.7
P04224 Mir7023-201ENSMUST00000185093 64 ntBASIC10.7□□□□□ -0.7
P04224 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Gm7063-201ENSMUST00000186840 981 ntBASIC10.7□□□□□ -0.7
P04224 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.7□□□□□ -0.7
P04224 Gm44069-201ENSMUST00000204898 506 ntBASIC10.7□□□□□ -0.7
P04224 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.7□□□□□ -0.7
P04224 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.7□□□□□ -0.7
P04224 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.7□□□□□ -0.7
P04224 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.7□□□□□ -0.7
P04224 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.7□□□□□ -0.7
P04224 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.7□□□□□ -0.7
P04224 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
P04224 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
P04224 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04224 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
P04224 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.69□□□□□ -0.7
P04224 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.69□□□□□ -0.7
P04224 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.69□□□□□ -0.7
P04224 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.69□□□□□ -0.7
P04224 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.69□□□□□ -0.7
P04224 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.69□□□□□ -0.7
P04224 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.69□□□□□ -0.7
P04224 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
P04224 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.69□□□□□ -0.7
P04224 Gm15429-201ENSMUST00000151268 798 ntBASIC10.69□□□□□ -0.7
P04224 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.69□□□□□ -0.7
P04224 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.69□□□□□ -0.7
P04224 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.69□□□□□ -0.7
P04224 Gm44855-201ENSMUST00000205725 362 ntBASIC10.69□□□□□ -0.7
P04224 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.69□□□□□ -0.7
P04224 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.69□□□□□ -0.7
P04224 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.69□□□□□ -0.7
P04224 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.69□□□□□ -0.7
P04224 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
P04224 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04224 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms