Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm22133-201ENSMUST00000102082 109 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Itgb3O54890 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Gm15711-201ENSMUST00000118889 535 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 Gm12164-201ENSMUST00000121695 551 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.92□□□□□ -0.34
Itgb3O54890 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.92□□□□□ -0.34
Itgb3O54890 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 Mir7070-201ENSMUST00000183657 86 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 Mir6927-201ENSMUST00000184494 71 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Itgb3O54890 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Itgb3O54890 Gm18730-201ENSMUST00000218038 343 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.92□□□□□ -0.34
Itgb3O54890 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Itgb3O54890 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.92□□□□□ -0.34
Itgb3O54890 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Itgb3O54890 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Itgb3O54890 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.91□□□□□ -0.34
Itgb3O54890 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Itgb3O54890 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm14247-201ENSMUST00000120950 237 ntBASIC12.91□□□□□ -0.34
Itgb3O54890 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.91□□□□□ -0.34
Itgb3O54890 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm28071-201ENSMUST00000190355 478 ntBASIC12.91□□□□□ -0.34
Itgb3O54890 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.91□□□□□ -0.34
Itgb3O54890 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.91□□□□□ -0.34
Itgb3O54890 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.91□□□□□ -0.34
Itgb3O54890 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Itgb3O54890 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Itgb3O54890 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.91□□□□□ -0.34
Itgb3O54890 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Itgb3O54890 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.9□□□□□ -0.34
Itgb3O54890 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Itgb3O54890 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Gm23949-201ENSMUST00000104027 127 ntBASIC12.9□□□□□ -0.34
Itgb3O54890 Gm23200-201ENSMUST00000104379 132 ntBASIC12.9□□□□□ -0.34
Itgb3O54890 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.9□□□□□ -0.34
Itgb3O54890 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.9□□□□□ -0.34
Itgb3O54890 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.9□□□□□ -0.34
Itgb3O54890 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Gm18827-201ENSMUST00000188341 790 ntBASIC12.9□□□□□ -0.34
Itgb3O54890 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.9□□□□□ -0.34
Itgb3O54890 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Itgb3O54890 Gm17827-201ENSMUST00000211825 742 ntBASIC12.9□□□□□ -0.34
Itgb3O54890 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.9□□□□□ -0.34
Itgb3O54890 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms