Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Polr1aO35134 AC168279.1-201ENSMUST00000214611 382 ntBASIC18.42■□□□□ 0.54
Polr1aO35134 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC18.42■□□□□ 0.54
Polr1aO35134 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Polr1aO35134 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC18.42■□□□□ 0.54
Polr1aO35134 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Polr1aO35134 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC18.42■□□□□ 0.54
Polr1aO35134 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr1aO35134 AC116503.1-201ENSMUST00000215445 2192 ntBASIC18.41■□□□□ 0.54
Polr1aO35134 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Polr1aO35134 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC18.41■□□□□ 0.54
Polr1aO35134 Gm11960-201ENSMUST00000122068 925 ntBASIC18.41■□□□□ 0.54
Polr1aO35134 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC18.41■□□□□ 0.54
Polr1aO35134 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Polr1aO35134 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Gm39288-201ENSMUST00000210554 446 ntBASIC18.41■□□□□ 0.54
Polr1aO35134 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC18.41■□□□□ 0.54
Polr1aO35134 Gm6722-201ENSMUST00000221586 390 ntBASIC18.41■□□□□ 0.54
Polr1aO35134 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Polr1aO35134 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Polr1aO35134 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC18.41■□□□□ 0.54
Polr1aO35134 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Gm14132-201ENSMUST00000117188 1719 ntBASIC18.41■□□□□ 0.54
Polr1aO35134 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr1aO35134 Gm13117-201ENSMUST00000120894 691 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Gm20495-201ENSMUST00000173902 235 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Gm43912-201ENSMUST00000204352 538 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Polr1aO35134 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC18.4■□□□□ 0.54
Polr1aO35134 Gm12247-201ENSMUST00000117585 670 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Gm13022-201ENSMUST00000121181 285 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Gm17192-201ENSMUST00000169031 511 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Gm19587-201ENSMUST00000191395 545 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC18.4■□□□□ 0.54
Polr1aO35134 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Polr1aO35134 Kcnk16-202ENSMUST00000225596 2127 ntBASIC18.4■□□□□ 0.54
Polr1aO35134 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr1aO35134 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Polr1aO35134 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Polr1aO35134 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Polr1aO35134 Gm38385-201ENSMUST00000194454 2351 ntBASIC18.39■□□□□ 0.53
Polr1aO35134 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Polr1aO35134 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Gm43692-201ENSMUST00000198236 1062 ntBASIC18.39■□□□□ 0.53
Polr1aO35134 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Polr1aO35134 Gm5996-201ENSMUST00000211110 718 ntBASIC18.39■□□□□ 0.53
Polr1aO35134 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Polr1aO35134 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr1aO35134 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms