Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 AU022133-201ENSMUST00000200601 873 ntBASIC12.71□□□□□ -0.37
Ebf3O08791 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.71□□□□□ -0.37
Ebf3O08791 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.71□□□□□ -0.37
Ebf3O08791 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.71□□□□□ -0.38
Ebf3O08791 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ebf3O08791 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf3O08791 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.71□□□□□ -0.38
Ebf3O08791 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ebf3O08791 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf3O08791 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf3O08791 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Ebf3O08791 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12616-201ENSMUST00000118594 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm15711-201ENSMUST00000118889 535 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12380-201ENSMUST00000119012 544 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm13461-201ENSMUST00000120980 662 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12624-201ENSMUST00000177615 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12621-201ENSMUST00000177760 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12615-201ENSMUST00000177970 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12622-201ENSMUST00000177975 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12627-201ENSMUST00000178412 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12625-201ENSMUST00000179122 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12614-201ENSMUST00000179586 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm12613-201ENSMUST00000180323 382 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm9230-201ENSMUST00000188228 532 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm7848-201ENSMUST00000210739 718 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Spcs1-203ENSMUST00000226374 592 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf3O08791 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.7□□□□□ -0.38
Ebf3O08791 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ebf3O08791 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.7□□□□□ -0.38
Ebf3O08791 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf3O08791 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ebf3O08791 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.69□□□□□ -0.38
Ebf3O08791 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ebf3O08791 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Gm15703-201ENSMUST00000120250 880 ntBASIC12.69□□□□□ -0.38
Ebf3O08791 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.69□□□□□ -0.38
Ebf3O08791 Gm18734-201ENSMUST00000172937 808 ntBASIC12.69□□□□□ -0.38
Ebf3O08791 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.69□□□□□ -0.38
Ebf3O08791 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.69□□□□□ -0.38
Ebf3O08791 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms