Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Gm7287-201ENSMUST00000205267 602 ntBASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Gm45668-201ENSMUST00000211271 493 ntBASIC11.1□□□□□ -0.63
Shisa8J3QNX5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Gm19163-201ENSMUST00000223313 780 ntBASIC11.1□□□□□ -0.63
Shisa8J3QNX5 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa8J3QNX5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm27701-201ENSMUST00000184498 110 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm24526-201ENSMUST00000082921 158 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.09□□□□□ -0.63
Shisa8J3QNX5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shisa8J3QNX5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Shisa8J3QNX5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Shisa8J3QNX5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shisa8J3QNX5 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms