Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm8707-201ENSMUST00000183325 980 ntBASIC6.58□□□□□ -1.36
Herc1E9PZP8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Ighv1-33-201ENSMUST00000193220 350 ntBASIC6.58□□□□□ -1.36
Herc1E9PZP8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm15889-202ENSMUST00000212669 2443 ntBASIC6.58□□□□□ -1.36
Herc1E9PZP8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC6.58□□□□□ -1.36
Herc1E9PZP8 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm27383-201ENSMUST00000184418 361 ntBASIC6.58□□□□□ -1.36
Herc1E9PZP8 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm37297-201ENSMUST00000192974 2384 ntBASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm15539-201ENSMUST00000118452 566 ntBASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc1E9PZP8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm44094-201ENSMUST00000204703 2030 ntBASIC6.57□□□□□ -1.36
Herc1E9PZP8 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm37012-201ENSMUST00000194991 1078 ntBASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm18711-201ENSMUST00000199341 750 ntBASIC6.57□□□□□ -1.36
Herc1E9PZP8 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Herc1E9PZP8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms