Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gm19184-201ENSMUST00000196798 928 ntBASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gm18062-201ENSMUST00000208020 547 ntBASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gm18055-201ENSMUST00000208254 547 ntBASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Snora73a-201ENSMUST00000082453 205 ntBASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28043E0CXC2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28043E0CXC2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Gm27514-201ENSMUST00000183692 110 ntBASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28043E0CXC2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms