Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm9116-201ENSMUST00000192400 1018 ntBASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gm25053-202ENSMUST00000199731 132 ntBASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gm9111-201ENSMUST00000219394 709 ntBASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gm44190-201ENSMUST00000205083 1401 ntBASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Gm7841-201ENSMUST00000122108 1629 ntBASIC15.36■□□□□ 0.05
Scn7aB1AYL1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm12194-201ENSMUST00000117756 1012 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm38314-201ENSMUST00000195709 625 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm25148-201ENSMUST00000104611 123 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Mir7051-201ENSMUST00000184167 73 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm19587-201ENSMUST00000191395 545 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm43380-201ENSMUST00000200421 220 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm19091-201ENSMUST00000208120 978 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.35■□□□□ 0.05
Scn7aB1AYL1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC15.34■□□□□ 0.05
Scn7aB1AYL1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC15.34■□□□□ 0.05
Scn7aB1AYL1 AC165154.1-201ENSMUST00000226661 340 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms