Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm14274-201ENSMUST00000117182 615 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm25492-201ENSMUST00000157383 129 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm26989-201ENSMUST00000182608 749 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm7082-201ENSMUST00000209880 969 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm45500-201ENSMUST00000211676 803 ntBASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col4a6B1AVK5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Gm26047-201ENSMUST00000157308 113 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Gm25554-201ENSMUST00000158075 113 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Gm20414-201ENSMUST00000172918 646 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Gm26047-202ENSMUST00000198840 115 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Gm18204-201ENSMUST00000209835 793 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a6B1AVK5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Col4a6B1AVK5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms