Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcn2Q9R0A1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clcn2Q9R0A1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm13316-201ENSMUST00000140537 691 ntBASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm42627-201ENSMUST00000197347 224 ntBASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcn2Q9R0A1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Gm15198-201ENSMUST00000117283 177 ntBASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Olfr284-202ENSMUST00000206647 966 ntBASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clcn2Q9R0A1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gm12502-201ENSMUST00000120197 444 ntBASIC12.48□□□□□ -0.41
Clcn2Q9R0A1 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms