Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm8018-201ENSMUST00000173536 789 ntBASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm37201-201ENSMUST00000191845 523 ntBASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm18753-201ENSMUST00000201000 566 ntBASIC11.38□□□□□ -0.59
Cdc40Q9DC48 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm14277-201ENSMUST00000121195 360 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm44124-201ENSMUST00000204159 472 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdc40Q9DC48 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Gm14017-201ENSMUST00000121934 386 ntBASIC11.36□□□□□ -0.59
Cdc40Q9DC48 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms