Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Gm13809-201ENSMUST00000117921 597 ntBASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Gm11511-201ENSMUST00000118146 540 ntBASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Rprl1-201ENSMUST00000158050 327 ntBASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Gm8194-201ENSMUST00000159783 859 ntBASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Gm8365-201ENSMUST00000197334 648 ntBASIC11.98□□□□□ -0.49
Rrp8Q9DB85 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Mir7686-201ENSMUST00000200604 57 ntBASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Gm15573-201ENSMUST00000119487 540 ntBASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.97□□□□□ -0.49
Rrp8Q9DB85 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Gm4607-201ENSMUST00000206649 577 ntBASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Grk6-205ENSMUST00000224653 2976 ntBASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rrp8Q9DB85 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms