Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gm8463-201ENSMUST00000208573 613 ntBASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.46□□□□□ -0.58
Chaf1bQ9D0N7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm8810-201ENSMUST00000172895 754 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm9022-201ENSMUST00000182482 992 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm15823-201ENSMUST00000064305 670 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm10146-201ENSMUST00000072739 309 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Gm2423-201ENSMUST00000074863 733 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chaf1bQ9D0N7 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chaf1bQ9D0N7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms