Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Gm27437-201ENSMUST00000183429 107 ntBASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx47Q9CWX9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx47Q9CWX9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm23119-201ENSMUST00000158610 140 ntBASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm32025-201ENSMUST00000217960 307 ntBASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx47Q9CWX9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ddx47Q9CWX9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms