Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm23439-201ENSMUST00000104292 132 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm13094-201ENSMUST00000117930 409 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm6606-201ENSMUST00000193613 947 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm12736-201ENSMUST00000119330 236 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm37851-201ENSMUST00000193871 889 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm4462-201ENSMUST00000166453 492 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm27675-201ENSMUST00000184527 94 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm43671-201ENSMUST00000200422 433 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.07□□□□□ -0.48
Cdh23Q99PF4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh23Q99PF4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Gm5706-201ENSMUST00000181525 993 ntBASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdh23Q99PF4 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Gm8384-201ENSMUST00000190905 704 ntBASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh23Q99PF4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms